Frontiers | Characterizing Promoter and Enhancer Sequences by a Deep Learning Method
Solving the transcription start site identification problem with ADAPT-CAGE: a Machine Learning algorithm for the analysis of CAGE data | Scientific Reports
Analysis of Enhancer–Promoter Interactions using CAGE and RADICL-Seq Technologies | SpringerLink
FANTOM4 EdgeExpressDB: an integrated database of promoters, genes, microRNAs, expression dynamics and regulatory interactions | Genome Biology | Full Text
Promoter sequence and architecture determine expression variability and confer robustness to genetic variants | eLife
Transcriptionally active enhancers in human cancer cells | Molecular Systems Biology
The miR-430 locus with extreme promoter density forms a transcription body during the minor wave of zygotic genome activation - ScienceDirect
Epigenomes | Free Full-Text | Promoter-Adjacent DNA Hypermethylation Can Downmodulate Gene Expression: TBX15 in the Muscle Lineage
CAGE-seq characterization of alternative promoter usage and full-length... | Download Scientific Diagram
Epigenomes | Free Full-Text | Promoter-Adjacent DNA Hypermethylation Can Downmodulate Gene Expression: TBX15 in the Muscle Lineage
Cap analysis of gene expression (CAGE) and noncoding regulatory elements | SpringerLink
Linking FANTOM5 CAGE peaks to annotations with CAGEscan | Scientific Data
Promoter sequence and architecture determine expression variability and confer robustness to genetic variants | bioRxiv
FANTOM - Basic CAGE Technology
Alternative promoters in CpG depleted regions pervasively account for epigenetic misregulation of cancer transcriptomes | bioRxiv
Cap analysis of gene expression reveals alternative promoter usage in a rat model of hypertension | Life Science Alliance
Cap analysis of gene expression reveals alternative promoter usage in a rat model of hypertension | Life Science Alliance
CAGEr: an R package for CAGE (Cap Analysis of Gene Expression) data analysis and promoterome mining
Systematic analysis of transcription start sites in avian development | PLOS Biology
A promoter-level mammalian expression atlas | Nature
Comparison between annotated TSS and CAGE. (a) Distance between... | Download Scientific Diagram
Epigenomes | Free Full-Text | Promoter-Adjacent DNA Hypermethylation Can Downmodulate Gene Expression: TBX15 in the Muscle Lineage
Homer Software and Data Download
Alternative transcription start sites contribute to acute-stress-induced transcriptome response in human skeletal muscle | Human Genomics | Full Text
EPD The Eukaryotic Promoter Database
Multiple transcription initiation and alternative promoter usage in G.... | Download Scientific Diagram
